1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g28577

Pir_g28577 (MSL4)


Aliases : MSL4

Description : mechanosensitive ion channel *(MSL) & original description: none


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g28577

Target Alias Description ECC score Gene Family Method Actions
AT2G17000 No alias Mechanosensitive ion channel family protein 0.02 OrthoFinder output from all 47 species
Adi_g014541 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29476 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01071 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15328 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09653 No alias mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26359 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43785.t1 MSL5, Aspi01Gene43785 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G100500.1 MSL5, Ceric.02G100500 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.02G100600.1 MSL6, Ceric.02G100600 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G023800.1 MSL6, Ceric.07G023800 mechanosensitive ion channel *(MSL) & original... 0.02 OrthoFinder output from all 47 species
Ceric.22G069800.1 MSL5, Ceric.22G069800 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G012600.1 MSL6, Ceric.35G012600 mechanosensitive ion channel *(MSL) & original... 0.05 OrthoFinder output from all 47 species
Ceric.38G068100.1 MSL5, Ceric.38G068100 mechanosensitive ion channel *(MSL) & original... 0.04 OrthoFinder output from all 47 species
Dde_g48251 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17956 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29706 MSL10, ATMSL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035448001 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.04 OrthoFinder output from all 47 species
Lfl_g28112 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428116g0010 MSL10, ATMSL10 mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species
Pir_g47569 MSL10, ATMSL10 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46634 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007089 MSL4 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Solyc08g061980.4.1 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species
Spa_g10135 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11582 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036222_P001 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 739 942
No external refs found!