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  5. Pir_g29898

Pir_g29898 (AtABI1, ABI1)


Aliases : AtABI1, ABI1

Description : clade A phosphatase & original description: none


Gene families : OG0000226 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000226_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g29898

Target Alias Description ECC score Gene Family Method Actions
AT1G17550 HAB2 homology to ABI2 0.03 OrthoFinder output from all 47 species
LOC_Os01g46760.1 PP2CA, ATPP2CA,... clade A phosphatase 0.02 OrthoFinder output from all 47 species
LOC_Os05g46040.1 HAB1, LOC_Os05g46040 regulatory phosphatase component of cytoplasm-localized... 0.02 OrthoFinder output from all 47 species
Spa_g54534 AtABI1, ABI1 clade A phosphatase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 31 205
No external refs found!