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  5. Pir_g32262

Pir_g32262


Description : not classified & original description: none


Gene families : OG0000049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g32262
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00217880 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G28580 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G28660 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G28670 ARAB-1 GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g47096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16366.t1 Aspi01Gene16366 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42819.t1 Aspi01Gene42819 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0020.g015558 No alias not classified & original description: CDS=56-1270 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026242 No alias not classified & original description: CDS=198-1145 0.03 OrthoFinder output from all 47 species
Ceric.31G052200.1 Ceric.31G052200 not classified & original description: pacid=50575091... 0.03 OrthoFinder output from all 47 species
Dde_g36807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010296001 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031083001 No alias Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11730.1 LOC_Os01g11730 GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g12320.1 LOC_Os01g12320 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g46120.1 LOC_Os01g46120 GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g46210.1 LOC_Os01g46210 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g06720.2 LOC_Os05g06720 GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g25400.1 LOC_Os10g25400 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g01408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_8577882g0010 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g38610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0242.g026639 No alias not classified & original description: CDS=1-276 0.04 OrthoFinder output from all 47 species
Sam_g25428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g099040.4.1 Solyc01g099040 Acetylajmalan esterase OS=Rauvolfia serpentina... 0.02 OrthoFinder output from all 47 species
Solyc05g013680.3.1 Solyc05g013680 GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e016451_P001 Zm00001e016451 Sinapine esterase OS=Brassica napus... 0.02 OrthoFinder output from all 47 species
Zm00001e020310_P001 Zm00001e020310 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e020311_P002 Zm00001e020311 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e025815_P001 Zm00001e025815 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e027181_P001 Zm00001e027181 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e031349_P001 Zm00001e031349 GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 9 229
No external refs found!