Pir_g32406

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g32406

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00210070	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT2G37590	DOF2.4, ATDOF2.4	DNA binding with one finger 2.4	0.03	OrthoFinder output from all 47 species
AT4G38000	DOF4.7	DNA binding with one finger 4.7	0.03	OrthoFinder output from all 47 species
Adi_g086972	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g18235	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26661	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g23147	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
MA_16692g0010	TMO6	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Ore_g03879	OBP4	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g17212	OBP3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g33574	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g41458	OBP4	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g11127	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g05155	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc05g054510.2.1	OBP3, Solyc05g054510	transcription factor (DOF)	0.07	OrthoFinder output from all 47 species
Solyc06g071480.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e010022_P001	OBP1, Zm00001e010022	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e041444_P001	Zm00001e041444	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	36	92

External Links

No external refs found!

Pir_g32406

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation