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  5. Pir_g33927

Pir_g33927 (ATDCL2, DCL2)


Aliases : ATDCL2, DCL2

Description : endoribonuclease (DCL2) of transacting siRNA pathway & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g33927

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.32 No alias No description available 0.01 OrthoFinder output from all 47 species
MA_10436554g0010 DCL4, ATDCL4 component DRB7 of DRB4-DRB7.1 siRNA biogenesis regulator complex 0.03 OrthoFinder output from all 47 species
MA_108060g0010 DCL1, CAF,... Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003100 PAZ_dom 846 967
IPR014720 dsRBD_dom 1338 1402
IPR000999 RNase_III_dom 1010 1127
IPR000999 RNase_III_dom 1200 1311
IPR001650 Helicase_C 374 493
IPR011545 DEAD/DEAH_box_helicase_dom 27 196
No external refs found!