1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g34282

Pir_g34282 (ATGSR1, GLN1;1,...)


Aliases : ATGSR1, GLN1;1, ATGLN1;1, GSR 1

Description : EC_6.3 ligase forming carbon-nitrogen bond & original description: none


Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g34282
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00241880 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.02 OrthoFinder output from all 47 species
AT1G66200 ATGSR2, GLN1;2, GSR2 glutamine synthase clone F11 0.02 OrthoFinder output from all 47 species
Als_g45891 ATGSR2, GLN1;2, GSR2 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56798.t1 GLN1;4, Aspi01Gene56798 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.39G059200.1 GLN1;4, Ceric.39G059200 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Dac_g05038 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g37528 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011072001 GS2, ATGSL1, GLN2 Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
LOC_Os03g50490.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.03 OrthoFinder output from all 47 species
Len_g44821 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Lfl_g36217 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Mp1g03980.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.03 OrthoFinder output from all 47 species
Mp5g13580.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.02 OrthoFinder output from all 47 species
Mp8g01410.1 GLN1.3, ATGSKB6, GLN1;3 Glutamine synthetase, chloroplastic OS=Chlamydomonas... 0.02 OrthoFinder output from all 47 species
Msp_g33326 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Sam_g16445 No alias EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Smo82032 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
Zm00001e015749_P003 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEA Interproscan
BP GO:0006542 glutamine biosynthetic process IEA Interproscan
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR008146 Gln_synth_cat_dom 122 254
IPR008147 Gln_synt_N 21 96
No external refs found!