Pir_g35430 (ERF1, ATERF1)

Aliases : ERF1, ATERF1

Description : subgroup ERF-IX transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g35430

Target	Alias	Description	ECC score	Gene Family Method
AT1G68550	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT3G61630	CRF6	cytokinin response factor 6	0.03	OrthoFinder output from all 47 species
Ceric.10G079000.1	ATERF-9, ERF9,...	subgroup ERF-VIII transcription factor & original...	0.05	OrthoFinder output from all 47 species
LOC_Os09g20350.1	RAP2.4, LOC_Os09g20350	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Pir_g44088	No alias	subgroup ERF-I transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g14155	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ppi_g30644	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.03	OrthoFinder output from all 47 species
Tin_g00486	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	120	170

External Links

No external refs found!