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  5. Pir_g35847

Pir_g35847 (PUB14, ATPUB14)


Aliases : PUB14, ATPUB14

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g35847

Target Alias Description ECC score Gene Family Method Actions
AT1G29340 ATPUB17, PUB17 plant U-box 17 0.03 OrthoFinder output from all 47 species
AT3G07360 PUB9, ATPUB9 plant U-box 9 0.03 OrthoFinder output from all 47 species
Adi_g019046 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026489 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080188 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083407 PUB13, ATPUB13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102535 ATPUB17, PUB17 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g05159 PUB12, AtPUB12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09506 PUB13, ATPUB13 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36187.t1 ATPUB17, PUB17,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06960 PUB14, ATPUB14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07191 PUB18, ATPUB18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02771 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06164 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13215 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009347001 No alias U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01016225001 PUB14, ATPUB14 U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os05g39930.1 LOC_Os05g39930 U-box domain-containing protein 16 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g14585 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09964 PUB18, ATPUB18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02242 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02363 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05165 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24080 No alias E3 ubiquitin ligase *(PUB15) & original description: none 0.02 OrthoFinder output from all 47 species
Smo73073 PUB39 U-box domain-containing protein 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc02g072080.1.1 ATPUB17, PUB17,... U-box domain-containing protein 17 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g008230.3.1 Solyc05g008230 E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species
Solyc09g018230.1.1 Solyc09g018230 U-box domain-containing protein 16 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc11g008390.2.1 PUB14, ATPUB14,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Spa_g14209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21993 PUB13, ATPUB13 E3 ubiquiTin ligase *(PUB15) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014377_P001 ATPUB17, PUB17,... U-box domain-containing protein 4 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 37 77
No external refs found!