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  5. Pir_g35967

Pir_g35967 (AT-GTL1, GTL1, AT-GTL2)


Aliases : AT-GTL1, GTL1, AT-GTL2

Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g35967
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene48921.t1 AT-GTL1, GTL1,... Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g30439 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08613 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26898 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_31300 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
LOC_Os10g37240.4 LOC_Os10g37240 Trihelix transcription factor GT-2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10436245g0010 PTL Trihelix transcription factor PTL OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_79519g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_934266g0010 PTL transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Pnu_g13076 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000092_P003 AT-GTL1, GTL1,... transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Zm00001e007383_P001 Zm00001e007383 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 79 165
No external refs found!