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  5. Pir_g35988

Pir_g35988


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g35988
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00085870 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00116p00025230 evm_27.TU.AmTr_v1... Probable pectinesterase 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g16363 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18114 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g19093 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20368 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37035 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38864 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26631 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12102 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14509 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01243 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05718.t1 Aspi01Gene05718 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31809.t1 Aspi01Gene31809 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31809.t2 Aspi01Gene31809 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31942.t1 Aspi01Gene31942 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59347.t1 Aspi01Gene59347 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59355.t1 Aspi01Gene59355 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63093.t1 Aspi01Gene63093 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G076400.1 Ceric.10G076400 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.21G056100.1 VGDH1, Ceric.21G056100 not classified & original description: pacid=50603924... 0.03 OrthoFinder output from all 47 species
Ceric.29G054600.1 Ceric.29G054600 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g09998 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06266 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14896 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16361 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42904 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25395 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g27753 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09538 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09802 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009729001 ATPE11, PE11 Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01013838001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01014641001 QRT1 Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01015022001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Gb_01459 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_01460 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_23209 No alias pectin methylesterase 0.05 OrthoFinder output from all 47 species
Gb_32012 QRT1 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_39595 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_41519 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os07g46190.1 LOC_Os07g46190 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Len_g13333 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10267810g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_10428207g0010 No alias Probable pectinesterase 53 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10428207g0020 No alias Probable pectinesterase 53 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10428610g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_304854g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_87592g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp4g01190.1 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Msp_g38949 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39582 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27618 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01612 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02205 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11138 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13885 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18465 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31507 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16125 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g36779 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Smo76951 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Solyc02g075620.4.1 Solyc02g075620 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc05g053680.1.1 Solyc05g053680 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc07g043240.4.1 Solyc07g043240 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Spa_g38344 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41355 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47305 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49902 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50750 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07049 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35486 No alias pecTin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41171 No alias pecTin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e002891_P001 Zm00001e002891 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e027944_P002 ATPE11, PE11,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e029074_P001 Zm00001e029074 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 88 377
No external refs found!