Aliases : AtRCD1, RCD1, ATP8, CEO1, CEO
Description : organellar-signalling mediator *(RCD1) & original description: none
Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g36020 | |
| Cluster | HCCA: Cluster_133 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0531.g075843 | SRO2 | not classified & original description: CDS=497-1708 | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03940 | SRO2 | organellar-signalling mediator *(RCD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g22111 | AtRCD1, RCD1,... | organellar-signalling mediator *(RCD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g076420.3.1 | AtRCD1, RCD1,... | Inactive poly [ADP-ribose] polymerase RCD1... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012999_P001 | AtRCD1, RCD1,... | Inactive poly [ADP-ribose] polymerase RCD1... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
| BP | GO:0010215 | cellulose microfibril organization | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
| MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030198 | extracellular matrix organization | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0043062 | extracellular structure organization | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| CC | GO:0070449 | elongin complex | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022003 | RST | 493 | 557 |
| No external refs found! |
