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  5. Pir_g37562

Pir_g37562 (HRE1)


Aliases : HRE1

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g37562
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00195730 DREB1B, ATCBF1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00051p00204250 DEAR2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00066390 RAP2.11,... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00132820 RAP2.11,... External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G25470 FTQ4, CBF2,... C-repeat/DRE binding factor 2 0.03 OrthoFinder output from all 47 species
AT4G25490 DREB1B, ATCBF1, CBF1 C-repeat/DRE binding factor 1 0.03 OrthoFinder output from all 47 species
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G11590 TINY2 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G51990 CBF4, DREB1D C-repeat-binding factor 4 0.03 OrthoFinder output from all 47 species
Adi_g004344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g013119 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g105586 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g09461 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g12610 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aev_g19050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19822 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g20161 TINY2 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aev_g41268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49009 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04224 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g01979 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aob_g07731 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g14409 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26610 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Aob_g32316 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Aop_g08977 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aop_g10291 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g62836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24329.t1 Aspi01Gene24329 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24330.t1 Aspi01Gene24330 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47256.t1 tny, Aspi01Gene47256 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56610.t1 DREB26, Aspi01Gene56610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56611.t1 DREB26, Aspi01Gene56611 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56623.t1 DREB26, Aspi01Gene56623 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000091 ATERF-9, ERF9, ATERF9 not classified & original description: CDS=1-585 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043715 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0119.g046680 No alias subgroup ERF-IX transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0143.g051439 No alias transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Azfi_s2254.g109997 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g07845 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ceric.12G060100.1 DREB26, Ceric.12G060100 not classified & original description: pacid=50601268... 0.04 OrthoFinder output from all 47 species
Dac_g15023 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g13644 ERF-1, ATERF-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02890 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08401 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001089001 Rap2.6L RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01005747001 DRN-LIKE, ESR2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01013914001 ERF-6-6, ERF6, ATERF6 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01013924001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01014291001 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01017315001 WIN1, SHN1 Cell wall.cutin and suberin.biosynthesis... 0.03 OrthoFinder output from all 47 species
GSVIVT01027770001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_01217 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_09495 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Gb_17210 IDD16, AtIDD16 transcription factor (DREB). C2H2 zinc finger... 0.04 OrthoFinder output from all 47 species
Gb_17212 DREB2B, DREB2 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g43970.1 LOC_Os02g43970 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g15660.1 DREB26, LOC_Os03g15660 Ethylene-responsive transcription factor ERF012... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46400.1 LOC_Os04g46400 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os04g46440.1 ERF38, ATERF38,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g09790.1 ORA47, LOC_Os06g09790 Ethylene-responsive transcription factor ERF018... 0.03 OrthoFinder output from all 47 species
LOC_Os06g40150.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
LOC_Os08g07700.1 LOC_Os08g07700 Ethylene-responsive transcription factor ERF087... 0.02 OrthoFinder output from all 47 species
LOC_Os09g13940.2 LOC_Os09g13940 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g20350.1 RAP2.4, LOC_Os09g20350 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Len_g13558 DEAR3 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Len_g15177 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20868 DEAR2 subgroup ERF-II-DEAR transcription factor & original... 0.04 OrthoFinder output from all 47 species
MA_10274g0010 Rap2.6L transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_10432800g0010 No alias transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_113446g0010 ORA47 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_116185g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_132427g0010 No alias transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_15000g0010 No alias Ethylene-responsive transcription factor ERF017... 0.03 OrthoFinder output from all 47 species
MA_214063g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_3405g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_4182g0010 Rap2.6L no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_436575g0010 TINY2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_54341g0010 WIN1, SHN1 transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
MA_5658g0010 ATERF12, ERF12 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_69434g0020 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1 OS=Solanum... 0.02 OrthoFinder output from all 47 species
MA_83118g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_937270g0010 ERF2, ATERF2, ATERF-2 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
MA_99821g0010 TMO3, CRF2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Mp1g20040.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Nbi_g04002 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g11606 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ore_g03524 ORA47 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20460 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26705 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g28444 ATERF12, ERF12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29063 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g36192 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36978 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g44015 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g44016 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g05879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15298 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g19327 DREB26 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Pnu_g22702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33487 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g38211 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Solyc01g008880.3.1 CRF5, Solyc01g008880 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc01g090345.1.1 ATERF13, ERF13,... Ethylene-responsive transcription factor 13... 0.03 OrthoFinder output from all 47 species
Solyc03g005500.1.1 ERF14, ATERF14,... transcription factor (ERF). transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc03g093540.1.1 Solyc03g093540 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g117130.3.1 Solyc03g117130 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g071770.3.1 ERF110, Solyc04g071770 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc04g072300.1.1 Solyc04g072300 Ethylene-responsive transcription factor FZP OS=Oryza... 0.03 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc09g089930.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc12g009490.3.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g05595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06936 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10938 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g25610 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g52072 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g52130 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g03837 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Tin_g37276 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e014008_P002 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Zm00001e018522_P001 CBF4, DREB1D,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e019159_P001 ERF110, Zm00001e019159 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e019566_P001 ATERF12, ERF12,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e030090_P001 DEAR3, Zm00001e030090 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e030585_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.02 OrthoFinder output from all 47 species
Zm00001e036437_P001 ERF7, ATERF7,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e038525_P001 DREB26, Zm00001e038525 Ethylene-responsive transcription factor ERF013... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0034511 U3 snoRNA binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 77 125
No external refs found!