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  5. Pir_g37624

Pir_g37624


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g37624

Target Alias Description ECC score Gene Family Method Actions
AT3G04030 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G13640 UNE16 Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
Dac_g14950 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01033528001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
MA_138039g0010 KAN2 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Pnu_g13769 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g24824 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e023282_P002 KAN2, Zm00001e023282 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e033756_P003 Zm00001e033756 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 21 72
IPR025756 Myb_CC_LHEQLE 121 168
No external refs found!