1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g38610

Pir_g38610


Description : not classified & original description: none


Gene families : OG0000049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38610
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00126710 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00230640 evm_27.TU.AmTr_v1... Alpha-L-fucosidase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00230810 evm_27.TU.AmTr_v1... GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G62280 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G01130 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g102962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27481.t1 Aspi01Gene27481 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39462.t1 Aspi01Gene39462 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0038.g026242 No alias not classified & original description: CDS=198-1145 0.05 OrthoFinder output from all 47 species
Ceric.10G086800.1 Ceric.10G086800 not classified & original description: pacid=50612051... 0.04 OrthoFinder output from all 47 species
Ceric.10G087000.1 Ceric.10G087000 not classified & original description: pacid=50612007... 0.05 OrthoFinder output from all 47 species
Ceric.29G039000.1 Ceric.29G039000 not classified & original description: pacid=50625114... 0.03 OrthoFinder output from all 47 species
Ehy_g18784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007554001 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031083001 No alias Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
Gb_16234 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os01g11730.1 LOC_Os01g11730 GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g12320.1 LOC_Os01g12320 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g22640.1 LOC_Os01g22640 GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g46120.1 LOC_Os01g46120 GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os06g47910.1 LOC_Os06g47910 GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g44780.1 LOC_Os07g44780 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g25340.1 LOC_Os10g25340 GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g31940.1 LOC_Os11g31940 Acetylajmalan esterase OS=Rauvolfia serpentina... 0.03 OrthoFinder output from all 47 species
MA_10331604g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g32262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63479 FXG1, ATFXG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo110510 No alias GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc01g079160.4.1 Solyc01g079160 GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc01g099020.3.1 Solyc01g099020 Acetylajmalan esterase OS=Rauvolfia serpentina... 0.03 OrthoFinder output from all 47 species
Solyc01g099030.4.1 Solyc01g099030 Acetylajmalan esterase OS=Rauvolfia serpentina... 0.05 OrthoFinder output from all 47 species
Solyc01g099040.4.1 Solyc01g099040 Acetylajmalan esterase OS=Rauvolfia serpentina... 0.02 OrthoFinder output from all 47 species
Solyc05g013680.3.1 Solyc05g013680 GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e016451_P001 Zm00001e016451 Sinapine esterase OS=Brassica napus... 0.02 OrthoFinder output from all 47 species
Zm00001e020310_P001 Zm00001e020310 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e020311_P002 Zm00001e020311 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e032079_P005 Zm00001e032079 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 37 352
No external refs found!