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  5. Pir_g38691

Pir_g38691


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38691

Target Alias Description ECC score Gene Family Method Actions
Adi_g005749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33897 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g34145 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g42294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g34224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37976 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g04818 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05672 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06797 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g07035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30196 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16831 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18871 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g67897 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67429.t1 Aspi01Gene67429 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06504 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06571 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33342 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G106200.1 Ceric.04G106200 not classified & original description: pacid=50630879... 0.03 OrthoFinder output from all 47 species
Ceric.19G075900.1 Ceric.19G075900 not classified & original description: pacid=50576584... 0.03 OrthoFinder output from all 47 species
Ceric.23G037000.1 CRR22, Ceric.23G037000 not classified & original description: pacid=50610097... 0.02 OrthoFinder output from all 47 species
Ceric.26G035200.1 Ceric.26G035200 not classified & original description: pacid=50599772... 0.03 OrthoFinder output from all 47 species
Ceric.33G060200.1 Ceric.33G060200 not classified & original description: pacid=50607485... 0.02 OrthoFinder output from all 47 species
Ceric.39G046500.1 Ceric.39G046500 not classified & original description: pacid=50582543... 0.01 OrthoFinder output from all 47 species
Cre01.g025950 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
Dac_g12748 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26710 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04207 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g05737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37501 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g43746 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33724 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10317671g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.01 OrthoFinder output from all 47 species
Msp_g13253 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g26370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15547 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27821 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04545 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15474 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10389 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24976 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29172 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g53472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06622 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g34486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011875_P001 OTP85, Zm00001e011875 RNA editing factor (OTP85) 0.01 OrthoFinder output from all 47 species
Zm00001e027846_P001 CRR21, Zm00001e027846 RNA editing factor (CRR21) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1205 1249
IPR002885 Pentatricopeptide_repeat 294 340
IPR002885 Pentatricopeptide_repeat 91 140
IPR002885 Pentatricopeptide_repeat 1100 1146
IPR002885 Pentatricopeptide_repeat 998 1045
IPR002885 Pentatricopeptide_repeat 193 239
IPR002885 Pentatricopeptide_repeat 493 539
IPR002885 Pentatricopeptide_repeat 1304 1350
IPR002885 Pentatricopeptide_repeat 696 735
IPR002885 Pentatricopeptide_repeat 268 290
IPR002885 Pentatricopeptide_repeat 568 590
IPR002885 Pentatricopeptide_repeat 872 893
IPR002885 Pentatricopeptide_repeat 598 627
IPR002885 Pentatricopeptide_repeat 800 826
IPR002885 Pentatricopeptide_repeat 395 422
IPR002885 Pentatricopeptide_repeat 900 926
IPR002885 Pentatricopeptide_repeat 769 794
IPR002885 Pentatricopeptide_repeat 1381 1403
No external refs found!