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  5. Pir_g39008

Pir_g39008 (ATCNGC13, CNGC13)


Aliases : ATCNGC13, CNGC13

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g39008

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g57370.1 DND2, CNGC4,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
MA_10431327g0010 DND1, ATCNGC2, CNGC2 Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_446575g0010 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel (CNGC) 0.05 OrthoFinder output from all 47 species
Mp4g04110.1 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Pir_g42887 ATCNGC1, CNGC1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.06 OrthoFinder output from all 47 species
Pir_g51567 CNGC19, ATCNGC19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo266723 ATCNGC20, CNGC20, CNBT1 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
Solyc03g007250.1.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 223 274
No external refs found!