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  5. Pir_g39201

Pir_g39201


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g39201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00172690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g37170... 0.03 OrthoFinder output from all 47 species
AT2G02980 OTP85 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.03 OrthoFinder output from all 47 species
Adi_g101277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17641 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g32918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21963.t1 Aspi01Gene21963 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42676.t1 Aspi01Gene42676 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001193 No alias not classified & original description: CDS=1-1761 0.04 OrthoFinder output from all 47 species
Azfi_s0020.g015535 OTP86 not classified & original description: CDS=1-2652 0.04 OrthoFinder output from all 47 species
Cba_g66834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75350 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.15G066400.1 Ceric.15G066400 not classified & original description: pacid=50640755... 0.04 OrthoFinder output from all 47 species
Ceric.23G042100.1 Ceric.23G042100 not classified & original description: pacid=50611070... 0.04 OrthoFinder output from all 47 species
Ceric.30G017600.1 Ceric.30G017600 not classified & original description: pacid=50608172... 0.05 OrthoFinder output from all 47 species
Ceric.30G066500.1 Ceric.30G066500 not classified & original description: pacid=50608384... 0.03 OrthoFinder output from all 47 species
Dac_g08183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09153 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27771 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g62910.1 CRR2, LOC_Os01g62910 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Len_g44130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07808 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g32476 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005856 No alias not classified & original description: CDS=1-2292 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007537 No alias not classified & original description: CDS=117-2237 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018323 No alias not classified & original description: CDS=1-1728 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022971 No alias not classified & original description: CDS=343-1173 0.02 OrthoFinder output from all 47 species
Sam_g17989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo115259 CRR2 Pentatricopeptide repeat-containing protein At3g24000,... 0.05 OrthoFinder output from all 47 species
Spa_g06116 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g08133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26191 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 214 261
IPR002885 Pentatricopeptide_repeat 518 564
IPR002885 Pentatricopeptide_repeat 315 360
IPR002885 Pentatricopeptide_repeat 288 310
IPR002885 Pentatricopeptide_repeat 186 213
IPR002885 Pentatricopeptide_repeat 418 445
IPR002885 Pentatricopeptide_repeat 390 415
IPR002885 Pentatricopeptide_repeat 116 144
IPR002885 Pentatricopeptide_repeat 491 512
No external refs found!