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  5. Pir_g39207

Pir_g39207 (AtPP2-B1, PP2-B1)


Aliases : AtPP2-B1, PP2-B1

Description : not classified & original description: none


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g39207
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT2G02300 PP2-B5, AtPP2-B5 phloem protein 2-B5 0.03 OrthoFinder output from all 47 species
AT2G02310 AtPP2-B6, PP2-B6 phloem protein 2-B6 0.03 OrthoFinder output from all 47 species
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.03 OrthoFinder output from all 47 species
Aob_g24739 AtPP2-B9, SKIP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g25309 PP2-A1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026408001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os04g48270.3 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
LOC_Os09g35680.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Len_g57449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_134768g0010 AtPP2-B6, PP2-B6 F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_413510g0010 PP2-B15, AtPP2-B15 F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g01690.1 PP2-A15, AtPP2-A15 F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Smo271662 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc10g051160.2.1 MEE66, Solyc10g051160 Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g085490.3.1 PP2-A15,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Zm00001e024648_P001 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e034748_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Zm00001e041427_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 132 284
No external refs found!