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  5. Pir_g39408

Pir_g39408


Description : TIFY-type transcription factor & original description: none


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g39408

Target Alias Description ECC score Gene Family Method Actions
Adi_g051075 JAZ4, TIFY6A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12081 JAZ4, TIFY6A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g41299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43326 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05825 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22116 JAZ9, TIFY7 TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08596 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43320 PPD2, TIFY4B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26926.t1 JAI3, JAZ3,... TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27114.t1 JAZ9, TIFY7,... TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34593.t1 TIFY10B, JAZ2,... TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g61859 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G114200.1 JAI3, JAZ3,... TIFY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G034600.1 Ceric.07G034600 not classified & original description: pacid=50626654... 0.03 OrthoFinder output from all 47 species
Ceric.07G035700.1 JAZ9, TIFY7,... TIFY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G056300.1 JAZ12, TIFY3B,... TIFY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G056200.1 Ceric.38G056200 not classified & original description: pacid=50580277... 0.04 OrthoFinder output from all 47 species
Dac_g03073 TIFY10A, JAZ1 TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023256001 JAZ12, TIFY3B RNA biosynthesis.transcriptional activation.TIFY... 0.04 OrthoFinder output from all 47 species
MA_10426545g0010 JAZ11, TIFY3A transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
MA_10426545g0020 TIFY10B, JAZ2 transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_10436815g0010 JAZ12, TIFY3B transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_131708g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_14247g0030 JAZ12, TIFY3B transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
MA_353910g0010 JAI3, JAZ3, TIFY6B transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_68496g0010 TIFY10B, JAZ2 transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_8355655g0010 JAZ12, TIFY3B transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_8757791g0010 TIFY10A, JAZ1 transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Msp_g19819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12620 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23723 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49976 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003621 JAZ9, TIFY7 TIFY-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007256 JAZ9, TIFY7 TIFY-type transcription factor & original description: CDS=1-435 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0198.g025531 JAI3, JAZ3, TIFY6B not classified & original description: CDS=1-1095 0.02 OrthoFinder output from all 47 species
Smo439249 TIFY10B, JAZ2 RNA biosynthesis.transcriptional activation.TIFY... 0.02 OrthoFinder output from all 47 species
Spa_g18435 JAI3, JAZ3, TIFY6B not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29625 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012855_P001 TIFY10B, JAZ2,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR010399 Tify_dom 52 79
No external refs found!