Pir_g40200


Description : not classified & original description: none


Gene families : OG0002549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002549_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g40200

Target Alias Description ECC score Gene Family Method Actions
Ceric.23G023200.1 Ceric.23G023200 not classified & original description: pacid=50611197... 0.03 OrthoFinder output from all 47 species
GSVIVT01006768001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01008964001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Mp6g13740.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g10310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20598 No alias regulatory factor *(RP8) of RNA polymerase RpoA activity... 0.02 OrthoFinder output from all 47 species
Ppi_g12165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!