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  5. Pir_g41877

Pir_g41877 (SBP1)


Aliases : SBP1

Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g41877
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
Aev_g08224 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05698 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20918 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os11g34020.1 RING, LOC_Os11g34020 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10430369g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g15589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019218 No alias not classified & original description: CDS=378-1583 0.02 OrthoFinder output from all 47 species
Solyc04g078760.4.1 SBP1, Solyc04g078760 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g06772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001146_P001 SBP1, Zm00001e001146 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0032259 methylation IEP HCCA

No InterPro domains available for this sequence

No external refs found!