Pir_g41942 (WRKY3)

Aliases : WRKY3

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g41942
Cluster	HCCA: Cluster_182

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00201230	ATWRKY40,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00078p00171140	ATWRKY13,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.04	OrthoFinder output from all 47 species
AT2G44745	No alias	WRKY family transcription factor	0.05	OrthoFinder output from all 47 species
AT2G46400	WRKY46, ATWRKY46	WRKY DNA-binding protein 46	0.03	OrthoFinder output from all 47 species
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.04	OrthoFinder output from all 47 species
AT4G31800	WRKY18, ATWRKY18	WRKY DNA-binding protein 18	0.05	OrthoFinder output from all 47 species
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.05	OrthoFinder output from all 47 species
Aev_g04786	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g13852	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g47915	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g32030	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20332	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g21563	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g39192	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g50608	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g41346	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g27046	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0557.g076884	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: CDS=1-963	0.03	OrthoFinder output from all 47 species
Ceric.08G068500.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g31692	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g21871	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g24743	ATWRKY24, WRKY24	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015952001	ATWRKY40, WRKY40	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01028147001	WRKY23, ATWRKY23	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_39366	WRKY31, ATWRKY31	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Gb_40257	ATWRKY71, WRKY71	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g14440.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g25770.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g27730.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
LOC_Os05g39720.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
LOC_Os09g25060.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Lfl_g36039	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_126273g0010	ATWRKY57, WRKY57	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_16118g0010	WRKY2, ATWRKY2	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
MA_3469g0010	WRKY2, ATWRKY2	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_47307g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_7831917g0010	AtWRKY47, WRKY47	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp1g24950.1	ATWRKY64, WRKY64	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Msp_g15358	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g22356	ATWRKY57, WRKY57	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g08423	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022893	WRKY33, ATWRKY33	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Solyc05g015850.4.1	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc06g068460.3.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc07g065260.4.1	AtWRKY20,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc12g056750.3.1	ATWRKY51,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g17851	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g22896	ABO3, WRKY63, ATWRKY63	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g51917	No alias	A1-class (Pepsin) protease & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004183_P001	AtWRKY41,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e009708_P001	WRKY53,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e011098_P001	WRKY75,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e020279_P001	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e027140_P002	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
Zm00001e027301_P001	WRKY54,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027804_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e029445_P001	WRKY3, Zm00001e029445	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e032260_P001	ATWRKY50,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e032444_P001	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e033862_P001	WRKY53,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0030286	dynein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	205	261
IPR003657	WRKY_dom	378	434

External Links

No external refs found!

Pir_g41942 (WRKY3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation