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  5. Pir_g41955

Pir_g41955


Description : effector receptor *(NLR) & original description: none


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g41955

Target Alias Description ECC score Gene Family Method Actions
AT1G56520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT1G69550 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from all 47 species
AT3G44480 cog1, RPP1 Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT3G44670 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G46470 RPS6 disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
GSVIVT01003262001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.02 OrthoFinder output from all 47 species
GSVIVT01025907001 TAO1 External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01026003001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
Gb_03482 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_20580g0040 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_34901g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5053586g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_75103g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_7654946g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_952149g0020 No alias Disease resistance-like protein DSC1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_9584314g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g20725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g24673 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g014840.3.1 Solyc01g014840 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 1 141
IPR002182 NB-ARC 155 258
No external refs found!