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  5. Pir_g42256

Pir_g42256 (SDD1)


Aliases : SDD1

Description : not classified & original description: none


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g42256
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00212440 ARA12,... Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00017p00214850 ARA12,... Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00017p00215540 evm_27.TU.AmTr_v1... Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00017p00215590 ARA12,... Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00017p00216640 SLP2,... Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00017p00216660 ARA12,... Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00017p00216950 ARA12,... Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00162250 evm_27.TU.AmTr_v1... Cucumisin OS=Cucumis melo 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00162360 evm_27.TU.AmTr_v1... Cucumisin OS=Cucumis melo 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00163680 evm_27.TU.AmTr_v1... Subtilisin-like protease SBT4.8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00176100 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00177600 SDD1,... Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00178060 SDD1,... Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00178340 evm_27.TU.AmTr_v1... Subtilisin-like protease SBT1.6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00165p00065060 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AMTR_s00165p00067080 evm_27.TU.AmTr_v1... Cucumisin OS=Cucumis melo 0.02 OrthoFinder output from all 47 species
AMTR_s00910p00007910 ATSBT5.4,... Subtilisin-like protease SBT5.4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G01900 ATSBT1.1, SBTI1.1 subtilase family protein 0.03 OrthoFinder output from all 47 species
AT1G62340 ALE, ALE1 PA-domain containing subtilase family protein 0.03 OrthoFinder output from all 47 species
AT3G14067 No alias Subtilase family protein 0.03 OrthoFinder output from all 47 species
AT4G21650 No alias Subtilase family protein 0.05 OrthoFinder output from all 47 species
AT5G59090 SBT4.12, ATSBT4.12 subtilase 4.12 0.04 OrthoFinder output from all 47 species
AT5G59130 No alias Subtilase family protein 0.02 OrthoFinder output from all 47 species
Aev_g16158 SLP3 protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60497.t1 Aspi01Gene60497 protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G019300.1 ATSBT1.3,... not classified & original description: pacid=50571825... 0.03 OrthoFinder output from all 47 species
GSVIVT01009471001 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01016445001 No alias Cucumisin OS=Cucumis melo 0.03 OrthoFinder output from all 47 species
LOC_Os02g17080.1 LOC_Os02g17080 Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g35140.1 ARA12, LOC_Os04g35140 Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_100805g0010 No alias Subtilisin-like protease SBT2.6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_2632784g0010 No alias Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g01740.1 ARA12 protease (SBT4) 0.03 OrthoFinder output from all 47 species
Mp6g08100.1 SLP3 protease (SBT2) 0.02 OrthoFinder output from all 47 species
Nbi_g01290 No alias protease *(SBT5) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24505 SLP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25349 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g006660.3.1 ATSBT5.2, Solyc01g006660 protease (SBT5) 0.03 OrthoFinder output from all 47 species
Solyc01g087780.2.1 Solyc01g087780 protease (SBT1) 0.02 OrthoFinder output from all 47 species
Solyc02g092680.1.1 ARA12, Solyc02g092680 protease (SBT1) 0.03 OrthoFinder output from all 47 species
Solyc04g078710.3.1 Solyc04g078710 no description available(sp|o82777|sbt3_sollc : 648.0) 0.03 OrthoFinder output from all 47 species
Solyc04g078730.1.1 Solyc04g078730 protease (SBT1) 0.02 OrthoFinder output from all 47 species
Solyc08g080010.1.1 ARA12, Solyc08g080010 Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g085530.1.1 ARA12, Solyc10g085530 Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g085540.1.1 Solyc10g085540 Subtilisin-like protease SBT1.8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g16506 AIR3 protease *(SBT5) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10609 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21522 No alias protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017390_P001 ATSBT5.2, Zm00001e017390 CO(2)-response secreted protease OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e025015_P001 AIR3, Zm00001e025015 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e034476_P001 ATSBT5.4,... protease (SBT5) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009349 riboflavin synthase complex IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000209 Peptidase_S8/S53_dom 148 577
IPR003137 PA_domain 372 458
IPR010259 S8pro/Inhibitor_I9 44 125
IPR041469 Subtilisin-like_FN3 654 751
No external refs found!