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  5. Pir_g42405

Pir_g42405


Description : subgroup ERF-II transcription factor *(ERF16/17/18) & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g42405
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00195730 DREB1B, ATCBF1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00141520 CBF4, DREB1D,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00111p00051610 TINY2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00115p00032780 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G28360 ATERF12, ERF12 ERF domain protein 12 0.03 OrthoFinder output from all 47 species
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 OrthoFinder output from all 47 species
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.05 OrthoFinder output from all 47 species
AT3G16280 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G27950 CRF4 cytokinin response factor 4 0.03 OrthoFinder output from all 47 species
AT4G34410 RRTF1 redox responsive transcription factor 1 0.05 OrthoFinder output from all 47 species
AT5G25190 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g013121 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g015562 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g018599 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g031493 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g034904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g057538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g073952 tny subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g074655 HRD subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g111958 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g01417 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g04908 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04224 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g13220 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33290 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g26090 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14888 No alias subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18832 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene03168.t1 Aspi01Gene03168 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04813.t1 DEAR1, CEJ1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24390.t1 RAP2.1, Aspi01Gene24390 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24392.t1 RAP2.1, Aspi01Gene24392 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25596.t1 Aspi01Gene25596 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene52705.t1 DREB26, Aspi01Gene52705 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53919.t1 Aspi01Gene53919 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Cba_g69291 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Ceric.02G058000.1 ERF7, ATERF7,... not classified & original description: pacid=50585662... 0.03 OrthoFinder output from all 47 species
Ceric.08G023300.1 Ceric.08G023300 not classified & original description: pacid=50638876... 0.03 OrthoFinder output from all 47 species
Ceric.15G043400.1 HRE2, Ceric.15G043400 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.24G043300.1 Ceric.24G043300 not classified & original description: pacid=50629223... 0.02 OrthoFinder output from all 47 species
Ceric.28G013900.1 Ceric.28G013900 subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.28G014900.1 Ceric.28G014900 subgroup ERF-I transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.28G035700.1 ATERF8, ATERF-8,... subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.30G071700.1 HRE2, Ceric.30G071700 not classified & original description: pacid=50607972... 0.02 OrthoFinder output from all 47 species
Dac_g05625 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g02579 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Dcu_g10280 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g39962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46772 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06062 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11677 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15134 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g25048 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g27365 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
GSVIVT01002262001 RAP2.4 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01010631001 DREB1B, ATCBF1, CBF1 Dehydration-responsive element-binding protein 1D... 0.02 OrthoFinder output from all 47 species
GSVIVT01013913001 ERF104 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01021098001 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01031747001 RRTF1 Alpha-amylase type B isozyme OS=Hordeum vulgare 0.03 OrthoFinder output from all 47 species
Gb_01210 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_01212 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_01213 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_01214 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_01215 ORA47 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_01216 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_01217 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_01221 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_17207 DREB2A, DREB2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_17208 DREB2A, DREB2 transcription factor (DREB). C2H2 zinc finger... 0.03 OrthoFinder output from all 47 species
Gb_17211 DREB2A, DREB2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_20532 DEAR3 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_26740 DEAR3 Ethylene-responsive transcription factor ERF008... 0.04 OrthoFinder output from all 47 species
LOC_Os01g12440.1 TMO3, CRF2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os01g66270.1 LOC_Os01g66270 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46440.1 ERF38, ATERF38,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g28350.1 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g34730.1 LOC_Os05g34730 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08340.1 LOC_Os06g08340 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g10780.1 LOC_Os06g10780 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g36000.1 TINY2, LOC_Os06g36000 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Len_g13962 ERF38, ATERF38 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g21808 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g28544 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g31233 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Lfl_g34326 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40614 ERF110 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_166248g0020 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_329325g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_33394g0020 ORA47 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_40338g0010 DREB26 Ethylene-responsive transcription factor ERF012... 0.04 OrthoFinder output from all 47 species
MA_500288g0010 ABI4, SAN5,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_5306433g0010 No alias Ethylene-responsive transcription factor ERF017... 0.04 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Msp_g14138 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g20272 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Nbi_g01210 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g14223 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g36821 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09341 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g15637 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g18808 DEAR4, RAP2.10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37577 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55167 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g60485 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g17102 ERF2, ATERF2, ATERF-2 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09795 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g30116 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013375 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016160 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023700 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g090560.4.1 Solyc01g090560 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc02g093130.3.1 DEAR3, Solyc02g093130 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g04184 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05270 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09064 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g14734 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17336 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g21487 RAP2.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21493 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Spa_g22026 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g24188 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25610 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g46619 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g46620 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g54949 TINY2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21433 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g30387 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Zm00001e006604_P001 ERF7, ATERF7,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e007332_P001 Zm00001e007332 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e016064_P001 RAP2.2, Zm00001e016064 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e016421_P001 CRF4, Zm00001e016421 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e019566_P001 ATERF12, ERF12,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e021579_P001 ERF7, ATERF7,... Pathogenesis-related genes transcriptional activator... 0.02 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e027351_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e031438_P002 HRE2, Zm00001e031438 Ethylene-responsive transcription factor RAP2-3... 0.05 OrthoFinder output from all 47 species
Zm00001e033965_P001 RAP2.4, Zm00001e033965 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e034242_P001 RAP2.12, Zm00001e034242 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e036130_P001 RAP2.4, Zm00001e036130 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e036260_P001 RAP2.12, Zm00001e036260 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e041620_P002 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 19 69
No external refs found!