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  5. Pir_g43110

Pir_g43110 (AGD11)


Aliases : AGD11

Description : calcium sensor *(CML) & original description: none


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g43110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s04023p00007260 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aop_g70312 UNE14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g42977 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.39G042000.1 UNE14, Ceric.39G042000 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g37155 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
MA_822732g0010 CML39, CML37 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g29580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g058170.1.1 Solyc04g058170 Probable calcium-binding protein CML44 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g074740.2.1 CML42, Solyc10g074740 Calcium-binding protein CAST OS=Solanum tuberosum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 188 253
IPR002048 EF_hand_dom 65 85
No external refs found!