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  5. Pir_g43559

Pir_g43559


Description : not classified & original description: none


Gene families : OG0000091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g43559
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00060450 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00042010 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00042470 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00175070 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G76600 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT2G30230 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT3G03280 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT3G50800 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g084638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g00750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01054.t1 Aspi01Gene01054 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36890.t1 Aspi01Gene36890 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36907.t1 Aspi01Gene36907 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68688.t1 Aspi01Gene68688 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68691.t1 Aspi01Gene68691 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68699.t1 Aspi01Gene68699 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68758.t1 Aspi01Gene68758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g17993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g59869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G096700.1 Ceric.14G096700 not classified & original description: pacid=50634186... 0.03 OrthoFinder output from all 47 species
Ceric.16G033100.1 Ceric.16G033100 not classified & original description: pacid=50589567... 0.02 OrthoFinder output from all 47 species
Dac_g07714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31299 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01013456001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_01099 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_05757 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_05758 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_05765 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_05766 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_35301 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_35304 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_35305 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g03080.1 LOC_Os01g03080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g19880.1 LOC_Os01g19880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09980.1 LOC_Os02g09980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09990.1 LOC_Os02g09990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g18660.1 LOC_Os03g18660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g19260.1 LOC_Os03g19260 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g55880.1 LOC_Os03g55880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g47960.1 LOC_Os05g47960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g03120.1 LOC_Os07g03120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g32000.1 LOC_Os09g32000 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g04739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10165933g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10427551g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10428693g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10432844g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_119175g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_120551g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_147379g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_24094g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_27857g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_31046g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_4985671g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7767108g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_897390g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9762162g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g19320.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g29597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo407681 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g109250.2.1 Solyc01g109250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g065430.1.1 Solyc02g065430 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g006160.1.1 Solyc03g006160 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g082960.1.1 Solyc04g082960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g06541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55602 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011957_P001 Zm00001e011957 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013167_P001 Zm00001e013167 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020136_P001 Zm00001e020136 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e026461_P001 Zm00001e026461 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030501_P001 Zm00001e030501 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034558_P001 Zm00001e034558 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038350_P001 Zm00001e038350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e042459_P001 Zm00001e042459 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 176
No external refs found!