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  5. Pir_g44088

Pir_g44088


Description : subgroup ERF-I transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g44088
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00009p00148470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G35700 ERF38, ATERF38 ERF family protein 38 0.02 OrthoFinder output from all 47 species
AT2G44940 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G16280 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.04 OrthoFinder output from all 47 species
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G11590 TINY2 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G52020 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g08193 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Aob_g33961 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g40604 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.1 OrthoFinder output from all 47 species
Aop_g10291 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06522.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11848.t2 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene11862.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene17089.t1 Aspi01Gene17089 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene21110.t1 DEAR2, Aspi01Gene21110 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53919.t1 Aspi01Gene53919 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56620.t1 RAP2.9, DEAR5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56622.t1 RAP2.9, DEAR5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62684.t2 DREB26, Aspi01Gene62684 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Dac_g37692 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dcu_g01084 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g42203 No alias subgroup ERF-V transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033793001 HRD RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01035098001 ERF72, EBP, ATEBP, RAP2.3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_29220 ERF-1, ATERF-1 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Gb_29359 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.04 OrthoFinder output from all 47 species
LOC_Os01g58420.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73770.1 CBF4, DREB1D,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g10760.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
LOC_Os04g46220.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g10780.1 LOC_Os06g10780 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os07g47330.1 PUCHI, LOC_Os07g47330 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os08g07700.1 LOC_Os08g07700 Ethylene-responsive transcription factor ERF087... 0.03 OrthoFinder output from all 47 species
LOC_Os08g41030.1 LOC_Os08g41030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g28440.1 RRTF1, LOC_Os09g28440 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g35010.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1B... 0.03 OrthoFinder output from all 47 species
LOC_Os12g39330.1 RAP2.11, LOC_Os12g39330 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
LOC_Os12g40960.1 LOC_Os12g40960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10430769g0010 tny transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_15251g0010 tny transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_2040g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Msp_g25476 CRF4 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g35430 ERF1, ATERF1 subgroup ERF-IX transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g36910 CBF4, DREB1D subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g51434 CBF4, DREB1D transcription factor *(CBF/DREB1) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c2_33310V3.1 ERF2, ATERF2,... ethylene responsive element binding factor 2 0.03 OrthoFinder output from all 47 species
Ppi_g30116 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010554 tny not classified & original description: CDS=1-1182 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025602 No alias subgroup ERF-V transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Solyc01g008880.3.1 CRF5, Solyc01g008880 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g005510.2.1 Solyc03g005510 transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
Solyc03g114440.1.1 RAP2.11, Solyc03g114440 transcription factor (ERF). transcription factor (ERN1) 0.05 OrthoFinder output from all 47 species
Solyc03g117230.1.1 Solyc03g117230 Ethylene-responsive transcription factor ERF084... 0.04 OrthoFinder output from all 47 species
Solyc08g007230.3.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc11g012980.1.1 Solyc11g012980 Ethylene-responsive transcription factor ERF012... 0.03 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Spa_g01688 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e001139_P001 DREB26, Zm00001e001139 Ethylene-responsive transcription factor ERF014... 0.04 OrthoFinder output from all 47 species
Zm00001e007447_P001 Zm00001e007447 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e014413_P001 Zm00001e014413 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e015312_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e015326_P001 Zm00001e015326 transcription factor (DREB) 0.06 OrthoFinder output from all 47 species
Zm00001e015327_P001 Zm00001e015327 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e015328_P001 Zm00001e015328 transcription factor (DREB) 0.07 OrthoFinder output from all 47 species
Zm00001e015946_P001 ERF110, Zm00001e015946 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e015968_P001 Zm00001e015968 transcription factor (DREB) 0.06 OrthoFinder output from all 47 species
Zm00001e023224_P001 Zm00001e023224 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e024669_P001 ERF110, Zm00001e024669 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e030585_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Zm00001e034242_P001 RAP2.12, Zm00001e034242 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e034741_P001 RAP2.11, Zm00001e034741 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Zm00001e041288_P001 Zm00001e041288 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 192 240
No external refs found!