Aliases : YLS7, TBL17
Description : not classified & original description: none
Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g44630 | |
| Cluster | HCCA: Cluster_199 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00135110 | TBL3,... | Protein trichome birefringence-like 3 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g057518 | TBL25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g17846 | TBL16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23909 | TBL26 | mannan O-acetyltransferase *(MOAT) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03004 | TBL14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19489 | TBL5 | polysaccharide O-acetyltransferase *(TBR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011180001 | TBL3 | Protein trichome birefringence-like 3 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01022317001 | TBL16 | Protein trichome birefringence-like 16 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01032800001 | ESK1, TBL29 | Cell wall.hemicellulose.xylan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g53380.1 | TBR, LOC_Os02g53380 | Protein trichome birefringence-like 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06532 | TBL24 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_430863g0010 | TBL16 | Protein trichome birefringence-like 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g26709 | TBL5 | polysaccharide O-acetyltransferase *(TBR) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0135.g022331 | TBL19 | not classified & original description: CDS=1-1941 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g087120.4.1 | TBL22, Solyc02g087120 | Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g089700.4.1 | TBL19, Solyc02g089700 | Protein trichome birefringence-like 19 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g005630.3.1 | TBL3, Solyc09g005630 | xylan O-acetyltransferase (XOAT) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g076570.2.1 | TBL3, Solyc10g076570 | xylan O-acetyltransferase (XOAT) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g014200.3.1 | TBL31, Solyc12g014200 | xylan O-acetyltransferase (XOAT) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g24186 | TBL14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e006156_P001 | TBL33, Zm00001e006156 | xylan O-acetyltransferase (XOAT) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e016007_P001 | TBR, Zm00001e016007 | Protein trichome birefringence OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030881_P001 | TBL27, Zm00001e030881 | Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030883_P001 | TBL27, Zm00001e030883 | Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036072_P001 | TBL27, Zm00001e036072 | Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016740 | transferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000966 | RNA 5'-end processing | IEP | HCCA |
| BP | GO:0001682 | tRNA 5'-leader removal | IEP | HCCA |
| MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| MF | GO:0004609 | phosphatidylserine decarboxylase activity | IEP | HCCA |
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
| MF | GO:0016843 | amine-lyase activity | IEP | HCCA |
| MF | GO:0016844 | strictosidine synthase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0030677 | ribonuclease P complex | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
| MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051235 | maintenance of location | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0099116 | tRNA 5'-end processing | IEP | HCCA |
| CC | GO:1902555 | endoribonuclease complex | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:1905348 | endonuclease complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |
