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  5. Pir_g46093

Pir_g46093 (MEE24, AtWRKY35, WRKY35)


Aliases : MEE24, AtWRKY35, WRKY35

Description : WRKY-type transcription factor & original description: none


Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g46093

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00102590 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00104p00109130 WRKY17,... RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
AMTR_s00130p00044000 ATWRKY65,... RNA biosynthesis.transcriptional activation.WRKY... 0.06 OrthoFinder output from all 47 species
AT2G24570 WRKY17, ATWRKY17 WRKY DNA-binding protein 17 0.05 OrthoFinder output from all 47 species
AT5G52830 ATWRKY27, WRKY27 WRKY DNA-binding protein 27 0.03 OrthoFinder output from all 47 species
Adi_g054269 WRKY21 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02296 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59086 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05127 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene53268.t1 WRKY74,... WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0156.g053706 ATWRKY11, WRKY11 WRKY-type transcription factor & original description: CDS=1-1914 0.07 OrthoFinder output from all 47 species
Cba_g32681 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.03G091400.1 ATWRKY11,... WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.06G067800.1 WRKY15, Ceric.06G067800 WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.07G043400.1 ATWRKY11,... WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G025500.1 WRKY17,... WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g01701 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16095 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21999 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05957 ATWRKY11, WRKY11 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001286001 WRKY39, ATWRKY39 RNA biosynthesis.transcriptional activation.WRKY... 0.07 OrthoFinder output from all 47 species
LOC_Os02g26430.1 WRKY21, LOC_Os02g26430 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os04g21950.1 ATWRKY11,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_109104g0010 MEE24, AtWRKY35, WRKY35 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Msp_g25668 WRKY17, ATWRKY17 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44691 ATWRKY65, WRKY65 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28236 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27101 WRKY22, AtWRKY22 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06116 WRKY21 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20362 WRKY14, AR411, ATWRKY14 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g079360.4.1 MEE24, AtWRKY35,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Spa_g08450 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11208 WRKY21 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007070_P001 MEE24, AtWRKY35,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP HCCA
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 51 108
No external refs found!