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  5. Pir_g46923

Pir_g46923


Description : not classified & original description: none


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g46923
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
Ala_g27838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48986.t1 Aspi01Gene48986 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g11445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10392 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g55820.1 LOC_Os01g55820 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g30830.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g43690.1 LOC_Os05g43690 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g04114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27804 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012023 No alias not classified & original description: CDS=866-1510 0.04 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g06484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016347_P001 Zm00001e016347 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.02 OrthoFinder output from all 47 species
Zm00001e035487_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 66 137
No external refs found!