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  5. Pir_g47784

Pir_g47784 (RCE1)


Aliases : RCE1

Description : E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original description: none


Gene families : OG0002378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g47784

Target Alias Description ECC score Gene Family Method Actions
Cre08.g370850 RCE1 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01031919001 RCE1 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.04 OrthoFinder output from all 47 species
Len_g04532 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g19611 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.02 OrthoFinder output from all 47 species
Smo271739 RCE1 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc04g079970.3.1 RCE1, Solyc04g079970 RUB conjugation E2 protein (RCE1) 0.04 OrthoFinder output from all 47 species
Spa_g05975 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0018580 nitronate monooxygenase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 33 168
No external refs found!