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  5. Pir_g47908

Pir_g47908


Description : not classified & original description: none


Gene families : OG0000548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g47908
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00110900 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G10580 No alias Protein of unknown function, DUF599 0.04 OrthoFinder output from all 47 species
AT5G24790 No alias Protein of unknown function, DUF599 0.04 OrthoFinder output from all 47 species
Als_g24761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g17408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g01205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06269 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_09350 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_18351 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g05770.1 LOC_Os08g05770 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g40940.1 LOC_Os08g40940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g15780.1 LOC_Os09g15780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g11717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_26720g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_879701g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9486006g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g29421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g39352 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g47407 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004185 No alias not classified & original description: CDS=213-944 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022373 No alias not classified & original description: CDS=333-1151 0.02 OrthoFinder output from all 47 species
Smo101278 No alias No description available 0.05 OrthoFinder output from all 47 species
Spa_g48898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003584_P002 Zm00001e003584 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016540 protein autoprocessing IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR006747 DUF599 16 212
No external refs found!