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  5. Pir_g48346

Pir_g48346


Description : effector receptor *(NLR) & original description: none


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g48346

Target Alias Description ECC score Gene Family Method Actions
AT1G17600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G17610 No alias Disease resistance protein (TIR-NBS class) 0.01 OrthoFinder output from all 47 species
AT1G31540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT1G63740 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT1G63860 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
AT1G72910 No alias Toll-Interleukin-Resistance (TIR) domain-containing protein 0.04 OrthoFinder output from all 47 species
AT1G72930 TIR toll/interleukin-1 receptor-like 0.03 OrthoFinder output from all 47 species
AT2G16870 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT3G04210 No alias Disease resistance protein (TIR-NBS class) 0.02 OrthoFinder output from all 47 species
AT3G44480 cog1, RPP1 Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G16900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT4G16990 RLM3 disease resistance protein (TIR-NBS class), putative 0.02 OrthoFinder output from all 47 species
AT5G40060 No alias Disease resistance protein (NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT5G40090 No alias Disease resistance protein (TIR-NBS class) 0.01 OrthoFinder output from all 47 species
AT5G46260 No alias disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.02 OrthoFinder output from all 47 species
AT5G58120 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
GSVIVT01023028001 No alias External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
MA_103890g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g31908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39053 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43673 No alias effector receptor *(NLR) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g102920.3.1 Solyc01g102920 effector receptor (NLR) 0.07 OrthoFinder output from all 47 species
Solyc01g113620.3.1 Solyc01g113620 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc04g007320.3.1 Solyc04g007320 effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Solyc11g011080.3.1 Solyc11g011080 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 2 141
IPR002182 NB-ARC 152 197
No external refs found!