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  5. Pir_g49419

Pir_g49419 (PGP2)


Aliases : PGP2

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g49419
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00254310 ABCB19,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00108620 PGP11,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00109790 PGP11,... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00045p00109940 PGP11,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00049p00128390 PGP16,... ABC transporter B family member 16 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00128460 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G27940 PGP13 P-glycoprotein 13 0.03 OrthoFinder output from all 47 species
AT3G28415 No alias ABC transporter family protein 0.03 OrthoFinder output from all 47 species
AT4G01830 PGP5 P-glycoprotein 5 0.03 OrthoFinder output from all 47 species
Adi_g029160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058585 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g105656 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25151 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26174 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33590 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28419 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Als_g33230 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40617 PGP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12898 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24610 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11005 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22258 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38133 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08453.t1 PGP11, Aspi01Gene08453 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32170.t1 ABCB14,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35821.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42787.t1 ATPGP4, PGP4,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42794.t1 ATPGP4, PGP4,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001326 PGP20 subfamily ABCB transporter & original description: CDS=439-4584 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012029 ABCB19,... subfamily ABCB transporter & original description: CDS=121-4035 0.04 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.03 OrthoFinder output from all 47 species
Cba_g07645 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75977 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000025.2 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000741.4 ATPGP4, PGP4, ABCB4, MDR4 ABC transporter B family member 21 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g03829 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06724 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10485 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13985 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14063 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23401 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45466 PGP11 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g46173 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28161 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13730 No alias subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17218 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27838 PGP11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01015306001 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01028256001 PGP11 Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Gb_02468 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_07563 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_08706 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_33057 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_33058 ABCB19,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
LOC_Os01g50160.1 PGP11, LOC_Os01g50160 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Lfl_g10739 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19646 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429045g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10432922g0010 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
MA_114017g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_636449g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_6870g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_79399g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_82945g0030 PGP17 ABC transporter B family member 17 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_9253g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_9415070g0020 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp3g11830.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp5g17400.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp7g04390.1 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mpzg01120.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g17749 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31505 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32270 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44397 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02494 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18266 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29613 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32847 PGP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19207 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28855 PGP10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29607 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30543 PGP18 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33236 ABCB19,... ABC-B-type transporter *(AMN3) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38163 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04029 PGP11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g47037 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60650 PGP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_16450V3.1 ABCB19,... ATP binding cassette subfamily B19 0.02 OrthoFinder output from all 47 species
Ppi_g03992 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13619 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035 PGP13 subfamily ABCB transporter & original description: CDS=555-4511 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291 PGP2 subfamily ABCB transporter & original description: CDS=1-4248 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197 No alias subfamily ABCB transporter & original description: CDS=1-2220 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021690 ABCB19,... not classified & original description: CDS=77-2374 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023107 PGP2 subfamily ABCB transporter & original description: CDS=729-4781 0.02 OrthoFinder output from all 47 species
Sam_g00802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g04479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24632 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo229984 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo99885 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc02g087410.4.1 Solyc02g087410 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc03g122070.3.1 ABCB19,... subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc06g009290.4.1 PGP21, Solyc06g009290 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc11g067300.2.1 PGP11, Solyc11g067300 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc12g098840.3.1 PGP11, Solyc12g098840 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Spa_g03247 ATPGP4, PGP4, ABCB4, MDR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17188 PGP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18839 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12815 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g38654 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014797_P002 Zm00001e014797 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e017444_P002 PGP21, Zm00001e017444 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 429 578
IPR011527 ABC1_TM_dom 89 361
IPR011527 ABC1_TM_dom 757 1022
IPR003439 ABC_transporter-like_ATP-bd 1089 1237
No external refs found!