Description : not classified & original description: none
Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g50631 | |
| Cluster | HCCA: Cluster_181 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00269160 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00032p00045230 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G10585 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G12540 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G62975 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G20970 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G25410 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT5G51780 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38252 | BHLH100 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g30730 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007772001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01018460001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018461001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020561001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_26737 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_119324g0010 | BHLH101 | transcription factor (bHLH). iron/copper homeostasis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_14352g0010 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_14544g0010 | No alias | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| MA_8008760g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g47256 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g114230.2.1 | Solyc03g114230 | Transcription factor bHLH162 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc10g008247.1.1 | Solyc10g008247 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc10g008260.2.1 | Solyc10g008260 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g079650.2.1 | BHLH100, Solyc10g079650 | transcription factor (bHLH). iron/copper homeostasis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g079660.3.1 | ORG2, BHLH038,... | transcription factor (bHLH). iron/copper homeostasis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g079680.3.1 | ORG2, BHLH038,... | transcription factor (bHLH). iron/copper homeostasis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g010585.1.1 | Solyc12g010585 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017129_P001 | Zm00001e017129 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005777 | peroxisome | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
| BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
| MF | GO:0010242 | oxygen evolving activity | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| MF | GO:0030515 | snoRNA binding | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
| BP | GO:0042549 | photosystem II stabilization | IEP | HCCA |
| CC | GO:0042579 | microbody | IEP | HCCA |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| MF | GO:0051087 | chaperone binding | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
