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  5. Pir_g54513

Pir_g54513


Description : component *(eS8) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000906 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000906_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g54513

Target Alias Description ECC score Gene Family Method Actions
AT5G20290 No alias Ribosomal protein S8e family protein 0.04 OrthoFinder output from all 47 species
Aev_g10713 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ala_g34365 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g62935 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g11567 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.79 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre06.g272800 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g29644 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01037763001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Gb_28325 No alias component RPS8 of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os04g28180.1 LOC_Os04g28180 component RPS8 of SSU proteome 0.03 OrthoFinder output from all 47 species
Lfl_g11961 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Mp2g16300.1 No alias component RPS8 of SSU proteome 0.03 OrthoFinder output from all 47 species
Pir_g03638 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c13_20020V3.1 Pp3c13_20020 Ribosomal protein S8e family protein 0.03 OrthoFinder output from all 47 species
Pp3c19_6490V3.1 Pp3c19_6490 Ribosomal protein S8e family protein 0.02 OrthoFinder output from all 47 species
Pp3c4_11370V3.1 Pp3c4_11370 Ribosomal protein S8e family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023905 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g15855 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Sam_g44958 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g53727 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e004092_P002 Zm00001e004092 component RPS8 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e024994_P001 Zm00001e024994 component RPS8 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e024995_P001 Zm00001e024995 component RPS8 of SSU proteome 0.05 OrthoFinder output from all 47 species
Zm00001e024996_P001 Zm00001e024996 component RPS8 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e024999_P001 Zm00001e024999 component RPS8 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 4 181
No external refs found!