Pir_g55034

Description : component *(eL32) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001000_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g55034

Target	Alias	Description	ECC score	Gene Family Method
Adi_g126327	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ala_g32062	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cba_g64641	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cre06.g289550	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Dac_g04434	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dac_g27003	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dac_g27058	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dcu_g35080	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
GSVIVT01005150001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01021377001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
LOC_Os08g41300.1	LOC_Os08g41300	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os09g32500.1	LOC_Os09g32500	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp7g12480.1	No alias	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Nbi_g45103	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c2_9590V3.1	Pp3c2_9590	Ribosomal protein L32e	0.02	OrthoFinder output from all 47 species
Ppi_g47089	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g12910	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g47289	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Solyc08g006900.3.1	Solyc08g006900	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Spa_g11641	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g17123	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g34311	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Zm00001e021938_P001	Zm00001e021938	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e034604_P001	Zm00001e034604	component RPL32 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Zm00001e034606_P001	Zm00001e034606	component RPL32 of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004568	chitinase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006022	aminoglycan metabolic process	IEP	HCCA
BP	GO:0006026	aminoglycan catabolic process	IEP	HCCA
BP	GO:0006030	chitin metabolic process	IEP	HCCA
BP	GO:0006032	chitin catabolic process	IEP	HCCA
BP	GO:0006040	amino sugar metabolic process	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0046348	amino sugar catabolic process	IEP	HCCA
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	HCCA
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001515	Ribosomal_L32e	15	123

External Links

No external refs found!

Pir_g55034

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation