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  5. Pir_g55179

Pir_g55179 (ROC7)


Aliases : ROC7

Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g55179
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Adi_g060434 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107742 ROC2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g128188 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06523.t2 ROC1, Aspi01Gene06523 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0176.g056010 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=207-734 0.03 OrthoFinder output from all 47 species
Ceric.10G059600.1 ROC7, Ceric.10G059600 EC_5.2 cis-trans-isomerase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.29 No alias Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000388.50 No alias Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Cre01.g002300 No alias Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
Cre12.g495951 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Dac_g23214 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43851 ROC5, ATCYP1 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000919001 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Gb_03562 ATCYP20-2, CYP20-2 component PnsL5 of NDH lumen subcomplex L. protein... 0.03 OrthoFinder output from all 47 species
LOC_Os01g18210.1 ROC4, LOC_Os01g18210 protein folding catalyst 0.04 OrthoFinder output from all 47 species
Lfl_g25791 ROC3 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43219 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03408 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60878 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13985 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27520 No alias EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38062 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050307 sucrose-phosphate phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 41 198
No external refs found!