Pir_g55696 (ATRAB1A, ATRABD2B, RAB1A)

Aliases : ATRAB1A, ATRABD2B, RAB1A

Description : D-class RAB GTPase & original description: none

Gene families : OG0001129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g55696

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00111p00145590	ATRAB1B, RABD2A,...	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
GSVIVT01023224001	ATFP8, RABD1, ATRABD1	Vesicle trafficking.regulation of membrane tethering and...	0.01	OrthoFinder output from all 47 species
Mp3g00710.1	ATRAB1A, ATRABD2B, RAB1A	D-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Pnu_g07909	ATRAB1A, ATRABD2B, RAB1A	D-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 47 species
Smo228158	RAB1C, ATRAB1C, ATRABD2C	Vesicle trafficking.regulation of membrane tethering and...	0.01	OrthoFinder output from all 47 species
Spa_g17450	RAB1C, ATRAB1C, ATRABD2C	D-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	2	133

External Links

No external refs found!