1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g56438

Pir_g56438 (LRL3)


Aliases : LRL3

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g56438
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00138470 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
AMTR_s00021p00146370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT1G25330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G28790 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G50915 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g17433 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ala_g10817 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26066 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g08145 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g29152 HEC2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03952.t1 Aspi01Gene03952 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene14949.t1 LRL3, Aspi01Gene14949 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35709.t2 Aspi01Gene35709 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46202.t1 Aspi01Gene46202 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene49972.t1 SPT, Aspi01Gene49972 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56356.t1 LRL1, Aspi01Gene56356 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71843.t1 LRL3, Aspi01Gene71843 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G020500.1 RSL2, Ceric.08G020500 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.09G026000.1 LRL3, Ceric.09G026000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G068300.1 Ceric.32G068300 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Dac_g21654 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31685 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ehy_g09150 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037846001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Gb_07156 PIF3, POC1, PAP3 transcription factor (bHLH). PIF red/far-red light... 0.02 OrthoFinder output from all 47 species
LOC_Os09g31300.1 LOC_Os09g31300 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Len_g00532 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46877 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34948 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43162 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Pnu_g27016 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33350 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006090 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0235.g026543 No alias bHLH-type transcription factor & original description: CDS=1-2082 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0237.g026567 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Solyc03g119390.4.1 BEE3, Solyc03g119390 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc05g006650.3.1 Solyc05g006650 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Tin_g31873 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005046_P003 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.02 OrthoFinder output from all 47 species
Zm00001e010540_P001 Zm00001e010540 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e018946_P001 Zm00001e018946 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 315 360
No external refs found!