Pir_g57076


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g57076

Target Alias Description ECC score Gene Family Method Actions
Adi_g003861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012988 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101343 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g102636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04252 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16831 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67897 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04075 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g11364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.03 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.03 OrthoFinder output from all 47 species
Dac_g18571 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33204 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01014727001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Gb_20571 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Len_g17777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07368 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37890 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22621 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04638 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18869 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013552 No alias not classified & original description: CDS=1-2598 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g017989 No alias not classified & original description: CDS=1-1851 0.03 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo131170 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc12g006575.1.1 OTP82, Solyc12g006575 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Spa_g04485 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13288 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24942 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 503 529
IPR002885 Pentatricopeptide_repeat 329 359
IPR002885 Pentatricopeptide_repeat 534 561
IPR002885 Pentatricopeptide_repeat 429 474
IPR002885 Pentatricopeptide_repeat 563 611
IPR002885 Pentatricopeptide_repeat 666 714
IPR002885 Pentatricopeptide_repeat 226 267
IPR033443 PPR_long 123 222
No external refs found!