Aliases : OTP86
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00057p00087430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00031420 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33680... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G36980 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003540 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036766 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g043528 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g057899 | OSB3 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g058519 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g096701 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g098725 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g18129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g07462 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g08884 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g22758 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g06742 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07162 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g17957 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26399 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26609 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30202 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30597 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g56508 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09002 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19351 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g67877 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009022 | No alias | not classified & original description: CDS=1-2334 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023799 | No alias | not classified & original description: CDS=1-1911 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0125.g048537 | No alias | not classified & original description: CDS=1-2229 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0312.g064188 | No alias | not classified & original description: CDS=1-2817 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0771.g086172 | CRR22 | not classified & original description: CDS=1-2199 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75279 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G058800.1 | Ceric.01G058800 | not classified & original description: pacid=50591781... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G086700.1 | Ceric.05G086700 | not classified & original description: pacid=50579096... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G059200.1 | Ceric.14G059200 | not classified & original description: pacid=50634117... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G079900.1 | VAC1, ECB2,... | not classified & original description: pacid=50614302... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G070800.1 | Ceric.29G070800 | not classified & original description: pacid=50625555... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G081200.1 | OTP86, Ceric.29G081200 | not classified & original description: pacid=50624479... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.35G064900.1 | Ceric.35G064900 | not classified & original description: pacid=50581299... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16805 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g32689 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36959 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g49213 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008407001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g49830.1 | LOC_Os02g49830 | Pentatricopeptide repeat-containing protein At3g22690... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g47510 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07691 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8319g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g20280 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34533 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g36747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16039 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g44630 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g01804 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08941 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20007 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03488 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04436 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05345 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14586 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g22081 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53565 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g56225 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007241 | No alias | protein S-acyltransferase *(PAT22) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0111.g020712 | EMB2758 | not classified & original description: CDS=1-2046 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13516 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g27765 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g49086 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g01739 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20189 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g39673 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g44341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23121 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019971_P001 | Zm00001e019971 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | HCCA |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006534 | cysteine metabolic process | IEP | HCCA |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | HCCA |
| BP | GO:0006563 | L-serine metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | HCCA |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046848 | E_motif | 698 | 760 |
| IPR002885 | Pentatricopeptide_repeat | 74 | 121 |
| IPR002885 | Pentatricopeptide_repeat | 276 | 323 |
| IPR002885 | Pentatricopeptide_repeat | 555 | 582 |
| IPR002885 | Pentatricopeptide_repeat | 583 | 613 |
| IPR002885 | Pentatricopeptide_repeat | 150 | 171 |
| IPR002885 | Pentatricopeptide_repeat | 178 | 208 |
| IPR002885 | Pentatricopeptide_repeat | 656 | 677 |
| IPR002885 | Pentatricopeptide_repeat | 482 | 509 |
| IPR002885 | Pentatricopeptide_repeat | 454 | 480 |
| No external refs found! |
