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  5. Pir_g57982

Pir_g57982


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g57982
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT5G04780 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g034865 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19052 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g58787 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72718 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G086700.1 Ceric.05G086700 not classified & original description: pacid=50579096... 0.03 OrthoFinder output from all 47 species
Ceric.14G073700.1 Ceric.14G073700 not classified & original description: pacid=50633781... 0.03 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.02 OrthoFinder output from all 47 species
Dcu_g38523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25445 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g45840.1 LOC_Os01g45840 Pentatricopeptide repeat-containing protein At2g36730... 0.02 OrthoFinder output from all 47 species
Len_g13048 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08499 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14701 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05130 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12690 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43235 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13279 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32073 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53939 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55034 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59100 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo93321 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08535 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21799 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 400 425
IPR002885 Pentatricopeptide_repeat 198 223
IPR002885 Pentatricopeptide_repeat 325 371
IPR002885 Pentatricopeptide_repeat 224 270
IPR002885 Pentatricopeptide_repeat 526 573
IPR002885 Pentatricopeptide_repeat 427 472
IPR002885 Pentatricopeptide_repeat 123 169
No external refs found!