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  5. Pir_g57988

Pir_g57988


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g57988

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00076010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00097640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
AMTR_s00122p00115170 CRR21 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AT1G77170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G22150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11263 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12351 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36540 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05671 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55219 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19301 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39842 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g43028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07081 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23995 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28718 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11318.t1 CRR22, Aspi01Gene11318 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20498.t1 CRR2, Aspi01Gene20498 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27322.t1 Aspi01Gene27322 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34758.t1 Aspi01Gene34758 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35394.t1 Aspi01Gene35394 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0020.g015372 OTP86 not classified & original description: CDS=1-2592 0.04 OrthoFinder output from all 47 species
Azfi_s0062.g035255 No alias not classified & original description: CDS=1-1599 0.03 OrthoFinder output from all 47 species
Azfi_s0389.g067649 OTP84 not classified & original description: CDS=1-2388 0.03 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.03 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.03 OrthoFinder output from all 47 species
Cba_g13415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G127500.1 EMB2744, Ceric.01G127500 not classified & original description: pacid=50592115... 0.03 OrthoFinder output from all 47 species
Ceric.06G069900.1 Ceric.06G069900 not classified & original description: pacid=50620408... 0.03 OrthoFinder output from all 47 species
Ceric.09G069300.1 OTP86, Ceric.09G069300 not classified & original description: pacid=50588354... 0.05 OrthoFinder output from all 47 species
Ceric.27G011400.1 Ceric.27G011400 not classified & original description: pacid=50605728... 0.02 OrthoFinder output from all 47 species
Dac_g02864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03777 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06831 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03455 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05340 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21844 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23619 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g25816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47958 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012159001 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
GSVIVT01014727001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
GSVIVT01024588001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01032721001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Gb_21745 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.04 OrthoFinder output from all 47 species
LOC_Os01g28570.1 LOC_Os01g28570 Pentatricopeptide repeat-containing protein At3g49710... 0.03 OrthoFinder output from all 47 species
LOC_Os01g74600.1 CRR22, LOC_Os01g74600 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g56400.1 LOC_Os03g56400 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g07474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18308 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g32845 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07741 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07804 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08907 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32916 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g33311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37426 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41108 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15172 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15547 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15700 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g16025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21416 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g22452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23758 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27965 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15249 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37890 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45078 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02838 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12351 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.01 OrthoFinder output from all 47 species
Ppi_g03231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04638 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53961 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56584 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004479 No alias not classified & original description: CDS=197-3106 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006762 No alias nucleoporin of nuclear pore complex *(NUP98) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007051 CRR22 not classified & original description: CDS=50-2191 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008817 CRR22 not classified & original description: CDS=1-2019 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012842 CRR2 not classified & original description: CDS=114-1901 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013917 No alias not classified & original description: CDS=1-2493 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019270 No alias not classified & original description: CDS=1-1617 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0252.g026781 No alias not classified & original description: CDS=1-2700 0.03 OrthoFinder output from all 47 species
Sam_g01747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo5521 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.02 OrthoFinder output from all 47 species
Solyc04g076800.3.1 CRR22, Solyc04g076800 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18963 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25939 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14871 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18985 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g38392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 150 198
IPR002885 Pentatricopeptide_repeat 251 298
IPR002885 Pentatricopeptide_repeat 354 400
IPR002885 Pentatricopeptide_repeat 455 504
IPR002885 Pentatricopeptide_repeat 558 605
IPR002885 Pentatricopeptide_repeat 226 248
IPR002885 Pentatricopeptide_repeat 634 656
IPR002885 Pentatricopeptide_repeat 124 146
IPR002885 Pentatricopeptide_repeat 532 554
No external refs found!