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  5. Pir_g58237

Pir_g58237


Description : component *(eL31) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000630 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g58237

Target Alias Description ECC score Gene Family Method Actions
AT5G56710 No alias Ribosomal protein L31e family protein 0.03 OrthoFinder output from all 47 species
Ala_g19969 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g18503 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g50668 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Aop_g71176 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g08010 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cba_g08011 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020703.20 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Cre12.g489153 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g07183 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01015251001 No alias 60S ribosomal protein L31 OS=Nicotiana glutinosa 0.04 OrthoFinder output from all 47 species
LOC_Os02g48660.1 LOC_Os02g48660 component RPL31 of LSU proteome component 0.07 OrthoFinder output from all 47 species
MA_14317g0010 No alias component RPL31 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp7g18320.1 No alias component RPL31 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Msp_g39885 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ore_g40201 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c10_8090V3.1 Pp3c10_8090 Ribosomal protein L31e family protein 0.01 OrthoFinder output from all 47 species
Pp3c14_7550V3.1 Pp3c14_7550 Ribosomal protein L31e family protein 0.03 OrthoFinder output from all 47 species
Pp3c1_34390V3.1 Pp3c1_34390 Ribosomal protein L31e family protein 0.01 OrthoFinder output from all 47 species
Sam_g05538 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g36402 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g36403 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo268515 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc12g008720.2.1 Solyc12g008720 component RPL31 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g05504 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Tin_g25963 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e003520_P001 Zm00001e003520 component RPL31 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e023413_P001 Zm00001e023413 component RPL31 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e036927_P001 Zm00001e036927 component RPL31 of LSU proteome component 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005861 troponin complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 36 117
No external refs found!