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  5. Pir_g59467

Pir_g59467


Description : not classified & original description: none


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g59467

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00240480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00272110 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00119p00120480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Aev_g42840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24162 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33061.t1 Aspi01Gene33061 arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44733.t1 Aspi01Gene44733 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55567.t1 Aspi01Gene55567 arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033619 No alias not classified & original description: CDS=1-465 0.02 OrthoFinder output from all 47 species
Azfi_s0204.g057707 No alias not classified & original description: CDS=495-1133 0.02 OrthoFinder output from all 47 species
Cba_g01588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24349 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_33141 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g59870.1 LOC_Os01g59870 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g20760.1 LOC_Os03g20760 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g57970.2 LOC_Os03g57970 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os07g07790.1 LOC_Os07g07790 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os07g07920.1 EDA4, LOC_Os07g07920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g06139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14614 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31013 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g59470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_118281g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_26320g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
MA_71069g0010 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Nbi_g04557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27615 No alias arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31936 No alias arabinogalactan protein *(Xylogen) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g44457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19919 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c14_3790V3.1 Pp3c14_3790 Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
Ppi_g11193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo443870 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc03g005200.3.1 Solyc03g005200 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc03g119620.1.1 Solyc03g119620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g054030.2.1 Solyc06g054030 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g082270.4.1 Solyc09g082270 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g11499 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e005336_P001 Zm00001e005336 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e005959_P003 Zm00001e005959 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e038813_P001 Zm00001e038813 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 31 114
No external refs found!