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  5. Pir_g59485

Pir_g59485


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g59485
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AT4G04605 No alias No description available 0.03 OrthoFinder output from all 47 species
Adi_g023997 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g025472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20512 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22830 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04353 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g32729 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g29471 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03462.t1 Aspi01Gene03462 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23034 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g20887 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g21452 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g31337 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g10417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15893 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g05894 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
MA_335624g0020 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
MA_8183372g0010 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Ppi_g41633 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ppi_g58021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017585 No alias not classified & original description: CDS=1499-2212 0.02 OrthoFinder output from all 47 species
Solyc07g045000.4.1 Solyc07g045000 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Solyc08g076400.3.1 KAN2, Solyc08g076400 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc10g078720.2.1 Solyc10g078720 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc12g006280.3.1 Solyc12g006280 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Zm00001e009294_P001 Zm00001e009294 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Zm00001e013758_P003 APL, WDY, Zm00001e013758 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e034056_P001 KAN, KAN1, Zm00001e034056 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e037731_P001 APL, WDY, Zm00001e037731 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 121 171
IPR025756 Myb_CC_LHEQLE 208 252
No external refs found!