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  5. Pir_g59875

Pir_g59875


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g59875

Target Alias Description ECC score Gene Family Method Actions
AT5G45580 No alias Homeodomain-like superfamily protein 0.01 OrthoFinder output from all 47 species
Aev_g03847 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22441 KAN, KAN1 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12916 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g22341 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g01625 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g29692 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10267.t1 Aspi01Gene10267 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene19889.t1 Aspi01Gene19889 transcription factor *(CLAUSA) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene48429.t2 Aspi01Gene48429 GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene59764.t1 Aspi01Gene59764 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene59765.t1 Aspi01Gene59765 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0481.g073115 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g11638 No alias transcription factor *(PHR1) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.12G033500.1 PHL1, Ceric.12G033500 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g08384 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g28111 No alias transcription factor *(CLAUSA) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g11678 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g14657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36463 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g48326 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ehy_g31337 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01028403001 PHR1, AtPHR1 Nutrient uptake.phosphorus assimilation.phosphate... 0.06 OrthoFinder output from all 47 species
Gb_05469 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Gb_17437 KAN, KAN1 G2-like GARP transcription factor 0.01 OrthoFinder output from all 47 species
Len_g27840 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g01611 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g40548 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Mp4g01560.1 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g11105 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g22383 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ore_g00386 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g01267 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Pir_g24991 KAN, KAN1 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29343 KAN2 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03187 No alias GARP subgroup PHL transcription factor & original... 0.14 OrthoFinder output from all 47 species
Spa_g50862 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g53602 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g30427 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001526_P001 Zm00001e001526 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e033757_P002 Zm00001e033757 G2-like GARP transcription factor 0.09 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e037731_P001 APL, WDY, Zm00001e037731 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 153 203
IPR025756 Myb_CC_LHEQLE 241 287
No external refs found!