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  5. Pir_g61308

Pir_g61308


Description : ABC-G-type lipid transporter *(STR) & original description: none


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g61308

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00181450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00031p00236610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT3G55110 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT4G25750 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020563.70 PDR4, ATPDR4 ABC transporter G family member 10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_24085 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g42900.1 LOC_Os01g42900 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g61940.1 LOC_Os01g61940 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os05g02890.1 LOC_Os05g02890 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Mp1g25240.1 No alias subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Mp3g16700.1 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp5g05620.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp7g03860.1 No alias subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Msp_g23417 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g37386 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g056470.1.1 Solyc05g056470 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc07g062630.1.1 Solyc07g062630 subfamily ABCG transporter 0.07 OrthoFinder output from all 47 species
Solyc09g005970.1.1 Solyc09g005970 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g41222 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 176 328
IPR043926 ABCG_dom 357 416
IPR013525 ABC_2_trans 603 811
No external refs found!